Nvivo allows you to perform data analysis for various qualitative research approaches.
In case study approach, if a research consists multiple units of analyses, Yin, Robert K. (2018) outlines an embedded case study design.
Since each embedded unit has its own different characteristics, many researchers end up creating different Nvivo projects for each of them.
In this video I tried to explain why it is a good idea to consider creating a single Nvivo project in such a scenario and how to structure it.
I attached the sample project file for your reference.
I hope this helps,
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Single context embedded design.nvp